Group - Schneidman Lab @ HUJI

Our Team

Dina Schneidman

Dina Schneidman

Associate Professor

dina.schneidman {at} mail.huji.ac.il

  • Integrative structure modeling of protein-protein interactions and large macromolecular assemblies
  • Structure modeling and design of adaptive immune response interactions
  • Deep learning methods for protein structure modeling, specificity, and design
  • Small angle x-ray scattering (SAXS) and Crosslinking mass spectrometry
Merav Braitbard

Merav Braitbard

PhD Student

merav.braitbard {at} mail.huji.ac.il

  • Integrative structure modeling of RSC assembly
  • Specificity of peptide-SH3 interactions
  • Modeling large macromolecular complexes with XLMS datasets
Tomer Cohen

Tomer Cohen

PhD Student

tomer.cohen13 {at} mail.huji.ac.il

  • Methods for nanobody/antibody modeling by deep learning
  • Antibody-antigen structure prediction and design
FoldDock architecture
Ben Shor

Ben Shor

PhD Student

ben.shor {at} mail.huji.ac.il

  • Assembly of large macromolecular complexes
CombFold
Gal Passi

Gal Passi

MSc Student

gal.passi {at} mail.huji.ac.il

  • Interpreting cancer mutations with deep learning models
Tanya Hochner

Tanya Hochner

MSc Student

tanya.hochner {at} mail.huji.ac.il

Deep learning models for predicting structure and specificity of peptide-MHC-TCR systems

Alon Aronson

Alon Aronson

MSc Student

alon.aronson {at} mail.huji.ac.il

Deep learning models for predicting structure and specificity of peptide-MHC-TCR systems

Meitar Sela

Meitar Sela

MSc Student

meitar.sela {at} mail.huji.ac.il

Deep learning models for predicting rhodopsin spectra maxima

Adi Weshler

Adi Weshler

PhD Student (joint with Prof. Michal Linial)

{at} mail.huji.ac.il

Amir Weinfeld

Amir Weinfeld

MSc Student (joint with Prof. Jérôme Tubiana)

amir.weinfeld {at} mail.huji.ac.il

  • Predicting peptide-SH3 specificity with deep learning
  • Predicting anti-drug-antibody (ADA) potential
Danielle Zaccai

Danielle Zaccai

Computational Biology Project

danielle.zaccai {at} mail.huji.ac.il

Upresolution of single molecule data

Alumni

Jerome Tubiana

Jerome Tubiana

Postdoc, now TAU Faculty

Development of novel deep learning architectures for protein structures, protein design, and binding site prediction.

Spike protein
Edan Patt

Edan Patt

MSc Student

Prediction of magnesium sites in RNA structures and modeling RNA dynamics with SAXS profiles.

Matan Halfon

Matan Halfon

MSc Student

Scoring functions for protein-protein docking.

Shon Cohen

Shon Cohen

MSc Student

Scoring functions for cross-linking MS data.

Nurit Meyer

Nurit Meyer

MSc Student

Modeling Hsp33-substrate interactions.

Amichai Holzer

Amichai Holzer

MSc Student

Developing a method for fitting structural fragments into cryo EM density maps.

Lirane Bitton

MSc Student

End-to-end deep learning of 3D structures for HLA class II epitopes.