Our Team
Dina Schneidman
Associate Professordina.schneidman {at} mail.huji.ac.il
- Integrative structure modeling of protein-protein interactions and large macromolecular assemblies
- Structure modeling and design of adaptive immune response interactions
- Deep learning methods for protein structure modeling, specificity, and design
- Small angle x-ray scattering (SAXS) and Crosslinking mass spectrometry
Merav Braitbard
PhD Studentmerav.braitbard {at} mail.huji.ac.il
- Integrative structure modeling of RSC assembly
- Specificity of peptide-SH3 interactions
- Modeling large macromolecular complexes with XLMS datasets
Tomer Cohen
PhD Studenttomer.cohen13 {at} mail.huji.ac.il
- Methods for nanobody/antibody modeling by deep learning
- Antibody-antigen structure prediction and design
Ben Shor
PhD Studentben.shor {at} mail.huji.ac.il
- Assembly of large macromolecular complexes
Gal Passi
MSc Studentgal.passi {at} mail.huji.ac.il
- Interpreting cancer mutations with deep learning models
Tanya Hochner
MSc Studenttanya.hochner {at} mail.huji.ac.il
Deep learning models for predicting structure and specificity of peptide-MHC-TCR systems
Alon Aronson
MSc Studentalon.aronson {at} mail.huji.ac.il
Deep learning models for predicting structure and specificity of peptide-MHC-TCR systems
Meitar Sela
MSc Studentmeitar.sela {at} mail.huji.ac.il
Deep learning models for predicting rhodopsin spectra maxima
Adi Weshler
PhD Student (joint with Prof. Michal Linial){at} mail.huji.ac.il
Amir Weinfeld
MSc Student (joint with Prof. Jérôme Tubiana)amir.weinfeld {at} mail.huji.ac.il
- Predicting peptide-SH3 specificity with deep learning
- Predicting anti-drug-antibody (ADA) potential
Danielle Zaccai
Computational Biology Projectdanielle.zaccai {at} mail.huji.ac.il
Upresolution of single molecule data
Alumni
Jerome Tubiana
Postdoc, now TAU FacultyDevelopment of novel deep learning architectures for protein structures, protein design, and binding site prediction.
Edan Patt
MSc StudentPrediction of magnesium sites in RNA structures and modeling RNA dynamics with SAXS profiles.
Matan Halfon
MSc StudentScoring functions for protein-protein docking.
Shon Cohen
MSc StudentScoring functions for cross-linking MS data.
Nurit Meyer
MSc StudentModeling Hsp33-substrate interactions.
Amichai Holzer
MSc StudentDeveloping a method for fitting structural fragments into cryo EM density maps.
Lirane Bitton
MSc StudentEnd-to-end deep learning of 3D structures for HLA class II epitopes.