Workshop in Computational Bioskills - Links

Workshop in Computational Bioskills

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Computational Biology Groups
Computational Biology Lab, Schoold of Computer Science, Hebrew University

Bioinformatics Lab, School of Medicine, Hebrew University

Perl related links
Perl Manuals (functions)

CPAN.org (search.cpan.org) (mirror at Weizmann)

perl.org

bioperl.org biopython.org biojava.org

UNIX/Windows related links
UNIXhelp, UNIX site by John December

Cygwin is really great !

Perl for windows at ActivePerl

Important Bioinformatics Databases
Entrez, PubMed, LocusLink

Databases page

Genomic Databases
Human Genome Drafts: at UCSC, at NIH, at EBI

Genomes at NCBI: Human, Mouse, Rat
Bacteria, Archea, Eukaryota, Viruses

The Mouse Genome Informatics, Mouse Genome Draft at UCSC

S. cerevisiae (Baker's Yeast): SCPD, SGD, NCBI

E.Coli: Colibri, EcoCyc, RegulonDB

Protein Databases
Swiss-Prot & TrEMBL - Protein knowledgebase + Computer-annotated supplement

ProSite - Protein families and domains

PDB - Protein Data Bank (Solved structures)

InterPro - Protein signatures Integrated-Database

Programs
BLAST (course)

FASTA (format)

More Courses
Computational Biology course at HUJI CS

Perl course by Yael Soffer

BioComputing Hypertext Coursebook

Perl Programming Course for Bioinformatics at the Weizmann Inst.

more links
Science > Biology > Bioinformatics > Education , (Google web directory)

PubCrawler - Alerting services for PubMed and GenBank

Amino Acid Propterties, Chemical Nature of the Amino Acids

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Naomi Habib, bioskill course, Last update: Sun Mar 12 13:31:33 JST 2007