BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1ajsA
(365 letters)
Database: all
74 sequences; 19,362 total letters
Searching.done
Score E
Sequences producing significant alignments: (bits) Value
1ajsA 747 0.0
aat2_arath 368 e-105
aatm_human 359 e-102
aatc_yeast 327 1e-92
aatm_lupan 319 3e-90
aat_haein 285 7e-80
tyrb_ecoli 264 1e-73
aat_ecoli 259 3e-72
phhc_pseae 246 4e-68
kv5c_mouse 23 0.68
hv54_mouse 23 0.68
cox1_emeni 20 4.4
fenr_chlre 20 5.7
>1ajsA
Length = 365
Score = 747 bits (1929), Expect = 0.0
Identities = 365/365 (100%), Positives = 365/365 (100%)
Query: 1 WVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLG 60
WVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLG
Sbjct: 1 WVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLG 60
Query: 61 GTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRG 120
GTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRG
Sbjct: 61 GTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRG 120
Query: 121 LDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQG 180
LDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQG
Sbjct: 121 LDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQG 180
Query: 181 FASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQM 240
FASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQM
Sbjct: 181 FASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQM 240
Query: 241 QKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTP 300
QKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTP
Sbjct: 241 QKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTP 300
Query: 301 GTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEA 360
GTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEA
Sbjct: 301 GTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEA 360
Query: 361 VTKIQ 365
VTKIQ
Sbjct: 361 VTKIQ 365
>aat2_arath
Length = 365
Score = 368 bits (944), Expect = e-105
Identities = 182/363 (50%), Positives = 251/363 (69%), Gaps = 6/363 (1%)
Query: 2 VLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGG 61
VL VVRK EQ++ N+ S EY+PI+G+++F +++L LG DSPA+ E RV VQ L G
Sbjct: 9 VLDVVRKAEQQLVNDPSRVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQCLSG 68
Query: 62 TGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGL 121
TG+LR+GAEFL Y+ + +Y+ PTW NH VF AG + +RY+D RGL
Sbjct: 69 TGSLRVGAEFLKTHYH-----QSVIYIPKPTWGNHPKVFNLAGLS-VEYFRYYDPATRGL 122
Query: 122 DLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGF 181
D +G L DL AP +I +LHACAHNPTG DPT EQW+QI +M+ + L PFFDSAYQGF
Sbjct: 123 DFKGLLEDLGAAPSGAIVLLHACAHNPTGVDPTSEQWEQIRQLMRSKSLLPFFDSAYQGF 182
Query: 182 ASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQ 241
ASG+L+ DA ++R FV++G E AQS++KN GLY ERVG L++V K D +V SQ++
Sbjct: 183 ASGSLDTDAQSVRTFVADGGECLIAQSYTKNMGLYGERVGALSIVCKSADVASKVESQVK 242
Query: 242 KIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPG 301
+VR +S+PP GA IVA L ++++ WT +K MADRI SMR +L ++A TPG
Sbjct: 243 LVVRPMYSSPPIHGASIVATILKSSDMYNNWTIELKEMADRIKSMRQQLFEAIQARGTPG 302
Query: 302 TWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEAV 361
W+HI QIGMF+FTGLN +QVE++ + HIY+ GRI+M GL++K + ++A ++H AV
Sbjct: 303 DWSHIIKQIGMFTFTGLNKEQVEFMTKEFHIYMTSDGRISMAGLSSKTVPHLADAMHAAV 362
Query: 362 TKI 364
T++
Sbjct: 363 TRL 365
>aatm_human
Length = 363
Score = 359 bits (922), Expect = e-102
Identities = 183/363 (50%), Positives = 250/363 (68%), Gaps = 7/363 (1%)
Query: 1 WVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLG 60
+VLP VRK E +IA + L+ EYLPI GLAEF ++ LALG++S L+ R VQ++
Sbjct: 8 YVLPSVRKAEAQIAAKN-LDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTIS 66
Query: 61 GTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRG 120
GTGALRIGA FL R++ + + V++ PTW NH +F AG + ++ YRY+D + G
Sbjct: 67 GTGALRIGASFLQRFFKFSRD----VFLPKPTWGNHTPIFRDAGMQ-LQGYRYYDPKTCG 121
Query: 121 LDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQG 180
D G + D+ PE S+ +LHACAHNPTG DP PEQWK+IA+V+K+R LF FFD AYQG
Sbjct: 122 FDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFDMAYQG 181
Query: 181 FASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQM 240
FASG+ +KDAWA+R+F+ +G + QS++KN GLY ERVG T+V K+ D RV SQ+
Sbjct: 182 FASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDADEAKRVESQL 241
Query: 241 QKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTP 300
+ ++R +SNPP GARI A L+ P+L +W VK MADRI+ MR++L + L+ +
Sbjct: 242 KILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKGMADRIIGMRTQLVSNLKKEGST 301
Query: 301 GTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEA 360
W HITDQIGMF FTGL P+QVE LI + IY+ GRI++ G+T+ N+ Y+A +IH+
Sbjct: 302 HNWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVTSSNVGYLAHAIHQ- 360
Query: 361 VTK 363
VTK
Sbjct: 361 VTK 363
>aatc_yeast
Length = 369
Score = 327 bits (839), Expect = 1e-92
Identities = 179/368 (48%), Positives = 230/368 (61%), Gaps = 13/368 (3%)
Query: 1 WVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLG 60
WVLP V+ E+ I N+SS NHEYL I GL + A+++ G S A QE RV VQSL
Sbjct: 8 WVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDAFQEDRVISVQSLS 67
Query: 61 GTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRG 120
GTGAL I A+F ++++ D VY+S PTW NH +F G K +Y YW E +
Sbjct: 68 GTGALHISAKFFSKFF-----PDKLVYLSKPTWANHMAIFENQGLKTA-TYPYWANETKS 121
Query: 121 LDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQG 180
LDL GFL+ ++ APE SIFVLH+CAHNPTG DPT EQW QI + + FD+AYQG
Sbjct: 122 LDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQG 181
Query: 181 FASGNLEKDAWAIRYFV---SEGFELFCAQSFSKNFGLYNERVG----NLTVVAKEPDSI 233
FA+G+L+KDA+A+R V S +F QSF+KN G+Y ERVG LT A+
Sbjct: 182 FATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIK 241
Query: 234 LRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRAR 293
V SQ+ KI+R SNPPA GA+IVA+ L PEL +W ++ TM+ RI MR LR
Sbjct: 242 PAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDH 301
Query: 294 LEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYV 353
L L TPG W+HI +Q GMFSFTGL P+ V+ L +YL+ SGR ++ GL N++YV
Sbjct: 302 LVKLGTPGNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYV 361
Query: 354 ATSIHEAV 361
A +I E V
Sbjct: 362 AKAIDEVV 369
>aatm_lupan
Length = 366
Score = 319 bits (818), Expect = 3e-90
Identities = 162/358 (45%), Positives = 230/358 (63%), Gaps = 8/358 (2%)
Query: 1 WVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLG 60
+VL VV K E + N EYL I GLA F + L LG D+PA++++RV VQ L
Sbjct: 8 YVLKVVNKAENLMLERGQ-NKEYLAIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLS 66
Query: 61 GTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRG 120
GTG+LR+GA + R++ G V +S+PTW NH +F A YRY+D + G
Sbjct: 67 GTGSLRLGAALIERYFPGAK-----VLISAPTWGNHKNIFNDARVP-WSEYRYYDPKTVG 120
Query: 121 LDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQG 180
LD +G + D++ APE + +LH CAHNPTG DPTPEQW++IA V++ + PFFD AYQG
Sbjct: 121 LDFEGMIEDIKAAPEGTFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 180
Query: 181 FASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQM 240
FASG+L++DA ++R FV+ G E+ AQS+SKN GLY ER+G + V++ P+S RV SQ+
Sbjct: 181 FASGSLDEDAASVRLFVARGLEVLVAQSYSKNLGLYAERIGAINVISSSPESAARVKSQL 240
Query: 241 QKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTP 300
++I R +SNPP GARIVA + +P LF EW ++ MA RI ++R +L + +
Sbjct: 241 KRIARPMYSNPPVHGARIVADIVGNPALFDEWKVEMEMMAGRIKNVRQQLYDSISSKDKS 300
Query: 301 G-TWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSI 357
G W+ I QIGMFS+TGLN Q + + N+ H+Y+ GRI++ GL+ +Y+A +I
Sbjct: 301 GKDWSFILKQIGMFSYTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 358
>aat_haein
Length = 360
Score = 285 bits (728), Expect = 7e-80
Identities = 152/356 (42%), Positives = 213/356 (59%), Gaps = 8/356 (2%)
Query: 2 VLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGG 61
++ V++ E+R+ + + YL I G+A++ L G DS +Q R VQSLGG
Sbjct: 9 IMHAVKEAEKRLFDKEKTKN-YLTIDGIADYNEQTKALLFGKDSEVIQSNRARTVQSLGG 67
Query: 62 TGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGL 121
TGALRI AEF+ R N V++S+PTW NHN +F G IR YRY+D E++ L
Sbjct: 68 TGALRIAAEFIKRQTKAQN-----VWISTPTWPNHNAIFNAVGMT-IREYRYYDAERKAL 121
Query: 122 DLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGF 181
D + L DL A E + +LH C HNPTG DPTPEQW+++A++ + P FD AYQG
Sbjct: 122 DWEHLLEDLSQASEGDVVLLHGCCHNPTGIDPTPEQWQELAALSAKNGWLPLFDFAYQGL 181
Query: 182 ASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQ 241
A+G L++DA+ +R F + EL A SFSKNFGLYNERVG T+VA+ + L+Q++
Sbjct: 182 ANG-LDEDAYGLRAFAANHKELLVASSFSKNFGLYNERVGAFTLVAENAEIASTSLTQVK 240
Query: 242 KIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPG 301
I+R +SNP + G VA L+D +L EW + M +RI MR L+
Sbjct: 241 SIIRTLYSNPASHGGATVATVLNDAQLRQEWENELTEMRERIKKMRHLFVQLLKEYGAEQ 300
Query: 302 TWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSI 357
++ I +Q GMFSF+GL +QV+ L N+ IY + SGRIN+ G+T N+ Y+ SI
Sbjct: 301 DFSFIIEQNGMFSFSGLTGEQVDRLKNEFAIYAVRSGRINVAGITEDNIRYLCESI 356
>tyrb_ecoli
Length = 361
Score = 264 bits (675), Expect = 1e-73
Identities = 144/356 (40%), Positives = 216/356 (60%), Gaps = 10/356 (2%)
Query: 2 VLPVVRKVEQRIANNSSLNHE---YLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQS 58
++P ++ V + A ++ H YLP+ GL +R + L G D P L+++RV +Q+
Sbjct: 6 IIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQT 65
Query: 59 LGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEK 118
LGG+GAL++GA+FL R++ ++ V+VS PTWENH +F AGF ++ +Y ++D
Sbjct: 66 LGGSGALKVGADFLKRYF-----PESGVWVSDPTWENHVAIFAGAGF-EVSTYPWYDEAT 119
Query: 119 RGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAY 178
G+ L+ L+ P SI +LH C HNPTG D T +QW + ++K R L PF D AY
Sbjct: 120 NGVRFNDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAY 179
Query: 179 QGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLS 238
QGF +G +E+DA+AIR S G + SFSK F LY ERVG L+V+ ++ ++ RVL
Sbjct: 180 QGFGAG-MEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLG 238
Query: 239 QMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALK 298
Q++ VR +S+PP GA++VA L+D L W V+ M RIL+MR EL L
Sbjct: 239 QLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEM 298
Query: 299 TPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVA 354
++++ +Q GMFS+TGL+ QV+ L + +YL+ SGR+ + GL T N+ VA
Sbjct: 299 PERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVA 354
>aat_ecoli
Length = 360
Score = 259 bits (663), Expect = 3e-72
Identities = 145/349 (41%), Positives = 198/349 (56%), Gaps = 8/349 (2%)
Query: 2 VLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGG 61
VL V+K EQ + N + + YL I G+ EF C L G S + +KR Q+ GG
Sbjct: 9 VLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGG 67
Query: 62 TGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGL 121
TGALR+ A+FLA+ N V+VS+P+W NH VF +AG ++R Y Y+D E L
Sbjct: 68 TGALRVAADFLAK-----NTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDAENHTL 121
Query: 122 DLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGF 181
D ++ L A + + H C HNPTG DPT EQW+ +A + + P FD AYQGF
Sbjct: 122 DFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGF 181
Query: 182 ASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQ 241
A G LE+DA +R F + EL A S+SKNFGLYNERVG T+VA + +++ R SQM+
Sbjct: 182 ARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMK 240
Query: 242 KIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPG 301
+R +SNPPA GA +VA LS+ L W + M RI MR L+
Sbjct: 241 AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANR 300
Query: 302 TWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNL 350
++ I Q GMFSF+GL +QV L + +Y + SGR+N+ G+T N+
Sbjct: 301 DFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNM 349
>phhc_pseae
Length = 357
Score = 246 bits (627), Expect = 4e-68
Identities = 143/356 (40%), Positives = 199/356 (55%), Gaps = 9/356 (2%)
Query: 2 VLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGG 61
+L V+ EQR+ + Y+ G A F + LALG SP L E+R Q+ GG
Sbjct: 9 ILRSVKLAEQRLVEQETTK-SYVGGHGDALFAARLAELALGAASPLLLEQRADATQTPGG 67
Query: 62 TGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGL 121
TGALR+ +F+A G +++S PTW H +F AG K + Y Y + R L
Sbjct: 68 TGALRLAGDFIAHCLPGRG-----IWLSDPTWPIHETLFAAAGLK-VSHYPYVSADNR-L 120
Query: 122 DLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGF 181
D++ L+ LE P+ + +LHAC HNPTG D + + W+++ V++RR L P D AYQGF
Sbjct: 121 DVEAMLAGLERIPQGDVVLLHACCHNPTGFDLSHDDWRRVLDVVRRRELLPLIDFAYQGF 180
Query: 182 ASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQ 241
G LE+DAWA+R F E E+ S SKNFGLY +RVG L V A+ + + + SQ+
Sbjct: 181 GDG-LEEDAWAVRLFAGELPEVLVTSSCSKNFGLYRDRVGALIVCAQNAEKLTDLRSQLA 239
Query: 242 KIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPG 301
+ R WS PPA GA +VA L D EL W V+ M RI S+R L L
Sbjct: 240 FLARNLWSTPPAHGAEVVAAILGDSELKGLWQEEVEGMRSRIASLRIGLVEALAPHGLAE 299
Query: 302 TWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSI 357
+ H+ Q GMFS+TGL+P+QV L ++ +YL+ SGR N+ GL + L +A +I
Sbjct: 300 RFAHVGAQRGMFSYTGLSPQQVARLRDEHAVYLVSSGRANVAGLHARRLGRLAQAI 355
>kv5c_mouse
Length = 202
Score = 22.7 bits (47), Expect = 0.68
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 71 FLARWYNGTNNKDTPV 86
F RW+ TN+KD V
Sbjct: 2 FFTRWFMSTNHKDIGV 17
>hv54_mouse
Length = 192
Score = 22.7 bits (47), Expect = 0.68
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 71 FLARWYNGTNNKDTPV 86
F RW+ TN+KD V
Sbjct: 2 FFTRWFMSTNHKDIGV 17
>cox1_emeni
Length = 170
Score = 20.0 bits (40), Expect = 4.4
Identities = 7/12 (58%), Positives = 9/12 (74%)
Query: 72 LARWYNGTNNKD 83
L+RW TN+KD
Sbjct: 1 LSRWLFSTNHKD 12
>fenr_chlre
Length = 292
Score = 19.6 bits (39), Expect = 5.7
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 2 VLPVVRKVEQRIANNSSLNHE 22
++P ++ + +R+A LN+E
Sbjct: 256 MMPGIQDMLERVAKEKGLNYE 276
Database: all
Posted date: Jun 25, 2002 2:02 AM
Number of letters in database: 19,362
Number of sequences in database: 74
Lambda K H
0.320 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,530
Number of Sequences: 74
Number of extensions: 693
Number of successful extensions: 40
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of query: 365
length of database: 19,362
effective HSP length: 57
effective length of query: 308
effective length of database: 15,144
effective search space: 4664352
effective search space used: 4664352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (20.0 bits)
S2: 37 (18.9 bits)