Arbel Moshe and Tommy Kaplan
Supplementary Material
- Coordinates of 2,000 early Zelda peaks used for clustering (ZLD_1hr_peaks.2000.bed, dm3)
- ... and following peak reorientation(ZLD_1hr_peaks.2000_oriented.bed, dm3)
- Aligned re-oriented chromatin data for each peak:
H3K18ac (c13),
H3K27ac (c13),
H3K27me3 (c13),
H3K4me1 (c13) and
H3K4me3 (c13).
- Clustering results (clusters)
- Chromatin profile used for genomic scanning:
H3K18ac (c13),
H3K27ac (c13),
H3K27me3 (c13),
H3K4me1 (c13) and
H3K4me3 (c13).
- Genomic scans for chromatin signatures: cluster 1 (promoter-like), cluster 2 (enhancer-like), and cluster 3 (dm3, bigwig format)
Saved session at UCSC Genome Browser (dm3).